Biblio | College of Agricultural Sciences

Found 21 results

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Journal Article

S. Smita, Lenka, S. Keshari, Katiyar, A., Jaiswal, P., Preece, J., and Bansal, K. Chander, “QlicRice: a web interface for abiotic stress responsive QTL and loci interaction channels in rice.”, Database : the journal of biological databases and curation, vol. 2011, p. bar037, 2011.

C. M. Britton and Wright, H. A., “A Portable Burner for Evaluating Effects of Fire on Plants”, Journal of Range Management, vol. 32, no. 6, p. 475, 1979.

L. Cooper, Meier, A., Laporte, M. - A., Elser, J. L., Mungall, C., Sinn, B. T., Cavaliere, D., Carbon, S., Dunn, N. A., Smith, B., Qu, B., Preece, J., Zhang, E., Todorovic, S., Gkoutos, G., Doonan, J. H., Stevenson, D. W., Arnaud, E., and Jaiswal, P., “The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.”, Nucleic acids research, vol. 46, pp. D1168-D1180, 2018.

K. Ilic, Kellogg, E. A., Jaiswal, P., Zapata, F., Stevens, P. F., Vincent, L. P., Avraham, S., Reiser, L., Pujar, A., Sachs, M. M., Whitman, N. T., McCouch, S. R., Schaeffer, M. L., Ware, D. H., Stein, L. D., and Rhee, S. Y., “The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant.”, Plant physiology, vol. 143, pp. 587-99, 2007.

S. Avraham, Tung, C. - W., Ilic, K., Jaiswal, P., Kellogg, E. A., McCouch, S., Pujar, A., Reiser, L., Rhee, S. Y., Sachs, M. M., Schaeffer, M., Stein, L., Stevens, P., Vincent, L., Zapata, F., and Ware, D., “The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.”, Nucleic acids research, vol. 36, pp. D449-54, 2008.

S. Naithani and Jaiswal, P., “Pathway Analysis and Omics Data Visualization Using Pathway Genome Databases: FragariaCyc, a Case Study.”, Methods in molecular biology (Clifton, N.J.), vol. 1533, pp. 241-256, 2017.

T. A. Beardslee, Roy-Chowdhury, S., Jaiswal, P., Buhot, L., Lerbs-Mache, S., Stern, D. B., and Allison, L. A., “A nucleus-encoded maize protein with sigma factor activity accumulates in mitochondria and chloroplasts.”, The Plant journal : for cell and molecular biology, vol. 31, pp. 199-209, 2002.

S. Naithani, Gupta, P., Preece, J., Garg, P., Fraser, V., Padgitt-Cobb, L. K., Martin, M., Vining, K., and Jaiswal, P., “Involving community in genes and pathway curation.”, Database : the journal of biological databases and curation, vol. 2019, 2019.

J. Azevedo, Courtois, F., Hakimi, M. - A., Demarsy, E., Lagrange, T., Alcaraz, J. - P., Jaiswal, P., Maréchal-Drouard, L., and Lerbs-Mache, S., “Intraplastidial trafficking of a phage-type RNA polymerase is mediated by a thylakoid RING-H2 protein.”, Proceedings of the National Academy of Sciences of the United States of America, vol. 105, pp. 9123-8, 2008.

K. Youens-Clark, Buckler, E., Casstevens, T., Chen, C., Declerck, G., Derwent, P., Dharmawardhana, P., Jaiswal, P., Kersey, P., Karthikeyan, A. S., Lu, J., McCouch, S. R., Ren, L., Spooner, W., Stein, J. C., Thomason, J., Wei, S., and Ware, D., “Gramene database in 2010: updates and extensions.”, Nucleic acids research, vol. 39, pp. D1085-94, 2011.

P. Jaiswal, “Gramene database: a hub for comparative plant genomics.”, Methods in molecular biology (Clifton, N.J.), vol. 678, pp. 247-75, 2011.

D. H. Ware, Jaiswal, P., Ni, J., Yap, I. V., Pan, X., Clark, K. Y., Teytelman, L., Schmidt, S. C., Zhao, W., Chang, K., Cartinhour, S., Stein, L. D., and McCouch, S. R., “Gramene, a tool for grass genomics.”, Plant physiology, vol. 130, pp. 1606-13, 2002.

D. Ware, Jaiswal, P., Ni, J., Pan, X., Chang, K., Clark, K., Teytelman, L., Schmidt, S., Zhao, W., Cartinhour, S., McCouch, S., and Stein, L., “Gramene: a resource for comparative grass genomics.”, Nucleic acids research, vol. 30, pp. 103-5, 2002.

C. Liang, Jaiswal, P., Hebbard, C., Avraham, S., Buckler, E. S., Casstevens, T., Hurwitz, B., McCouch, S., Ni, J., Pujar, A., Ravenscroft, D., Ren, L., Spooner, W., Tecle, I., Thomason, J., Tung, C. - W., Wei, X., Yap, I., Youens-Clark, K., Ware, D., and Stein, L., “Gramene: a growing plant comparative genomics resource.”, Nucleic acids research, vol. 36, pp. D947-53, 2008.

P. Jaiswal, Ni, J., Yap, I., Ware, D., Spooner, W., Youens-Clark, K., Ren, L., Liang, C., Zhao, W., Ratnapu, K., Faga, B., Canaran, P., Fogleman, M., Hebbard, C., Avraham, S., Schmidt, S., Casstevens, T. M., Buckler, E. S., Stein, L., and McCouch, S., “Gramene: a bird’s eye view of cereal genomes.”, Nucleic acids research, vol. 34, pp. D717-23, 2006.

V. Shulaev, Sargent, D. J., Crowhurst, R. N., Mockler, T. C., Folkerts, O., Delcher, A. L., Jaiswal, P., Mockaitis, K., Liston, A., Mane, S. P., Burns, P., Davis, T. M., Slovin, J. P., Bassil, N., Hellens, R. P., Evans, C., Harkins, T., Kodira, C., Desany, B., Crasta, O. R., Jensen, R. V., Allan, A. C., Michael, T. P., Setubal, J. Carlos, Celton, J. - M., D Rees, J. G., Williams, K. P., Holt, S. H., Rojas, J. Jairo Ruiz, Chatterjee, M., Liu, B., Silva, H., Meisel, L., Adato, A., Filichkin, S. A., Troggio, M., Viola, R., Ashman, T. - L., Wang, H., Dharmawardhana, P., Elser, J., Raja, R., Priest, H. D., Bryant, D. W., Fox, S. E., Givan, S. A., Wilhelm, L. J., Naithani, S., Christoffels, A., Salama, D. Y., Carter, J., Girona, E. Lopez, Zdepski, A., Wang, W., Kerstetter, R. A., Schwab, W., Korban, S. S., Davik, J., Monfort, A., Denoyes-Rothan, B., Arus, P., Mittler, R., Flinn, B., Aharoni, A., Bennetzen, J. L., Salzberg, S. L., Dickerman, A. W., Velasco, R., Borodovsky, M., Veilleux, R. E., and Folta, K. M., “The genome of woodland strawberry(Fragaria vesca).”, Nature genetics, vol. 43, pp. 109-16, 2011.

M. D. Madsen, Hulet, A., Phillips, K., Staley, J. L., Svejcar, T., and Davies, K. W., “Extruded seed pellets: a novel approach for enhancing sagebrush seedling emergence”, Native Plants Journal, vol. 17, no. 3, pp. 230 - 243, 2016.

V. V. Peremyslov, Mockler, T. C., Filichkin, S. A., Fox, S. E., Jaiswal, P., Makarova, K. S., Koonin, E. V., and Dolja, V. V., “Expression, splicing, and evolution of the myosin gene family in plants.”, Plant physiology, vol. 155, pp. 1191-204, 2011.

R. F. Miller, Krueger, W. Clement, and Vavra, M., “Deer and Elk Use on Foothill Rangelands in Northeastern Oregon”, Journal of Range Management, vol. 34, no. 3, p. 201, 1981.

Y. Yamazaki and Jaiswal, P., “Biological ontologies in rice databases. An introduction to the activities in Gramene and Oryzabase.”, Plant & cell physiology, vol. 46, pp. 63-8, 2005.

Conference Paper

H. A. F. E. R. K. A. M. P. R Marshall, “Environmental factors affecting plant productivity”, in Fort Keogh research symposium, 1988.